skills/bioservices/scripts/protein_analysis_workflow.py

• resolve_ncbi_email · function · L43-L48 — def resolve_ncbi_email(cli_email=None)
• search_protein · function · L51-L105 — def search_protein(query)
• retrieve_sequence · function · L108-L135 — def retrieve_sequence(uniprot, uniprot_id)
• run_blast · function · L138-L205 — def run_blast(sequence, email, skip=False)
• discover_pathways · function · L208-L262 — def discover_pathways(uniprot, kegg, uniprot_id)
• find_interactions · function · L265-L312 — def find_interactions(protein_query)
• get_go_annotations · function · L315-L369 — def get_go_annotations(uniprot_id)
• main · function · L372-L437 — def main()