# Reference: pyGenomeTracks 3.8+ | Verify config keys with `make_tracks_file --version`
[x-axis]
where = top

[spacer]
height = 0.2

[sample1 coverage]
file = sample1.bw
title = Sample 1 Coverage
height = 4
color = #4DBBD5
min_value = 0
number_of_bins = 500
nans_to_zeros = true
summary_method = mean
show_data_range = true
file_type = bigwig

[spacer]
height = 0.2

[sample2 coverage]
file = sample2.bw
title = Sample 2 Coverage
height = 4
color = #E64B35
min_value = 0
number_of_bins = 500
nans_to_zeros = true
summary_method = mean
show_data_range = true
file_type = bigwig

[spacer]
height = 0.5

[peaks]
file = peaks.narrowPeak
title = Peaks
height = 2
color = #3C5488
border_color = none
labels = false
file_type = narrowPeak
show_labels = false

[spacer]
height = 0.5

[genes]
file = genes.gtf
title = Genes
height = 6
fontsize = 10
style = UCSC
prefered_name = gene_name
merge_transcripts = false
labels = true
max_labels = 60
all_labels_inside = true
color = #00A087
border_color = black
height_utr = 0.6
arrow_interval = 10
arrowhead_included = true
file_type = gtf