skills/bioskills/bio-systems-biology-context-specific-models/scripts/context_specific.py

• reaction_activity · function · L16-L20 — def reaction_activity(rxn, gene_expr, default=0.5)
• gimme_style_stub · function · L23-L36 — def gimme_style_stub(model, gene_expr, low_quantile, growth_floor=GROWTH_FLOOR)
• simulate_expression · function · L39-L45 — def simulate_expression(model, active=('glycolysis', 'pentose'))
• main · function · L48-L69 — def main()