skills/bioskills/bio-rna-structure-ncrna-search/scripts/parse_infernal.py

• parse_cmscan_tblout · function · L14-L42 — def parse_cmscan_tblout(tblout_file)
• deoverlap_clans · function · L45-L47 — def deoverlap_clans(df)
• filter_hits · function · L50-L55 — def filter_hits(df, evalue_threshold=1e-5, min_score=None)
• summarize_families · function · L58-L62 — def summarize_families(df)
• extract_hit_sequences · function · L65-L81 — def extract_hit_sequences(fasta_file, hits_df, output_file)