skills/bioskills/bio-proteomics-differential-abundance/scripts/differential_abundance.py

• preprocess · function · L12-L15 — def preprocess(intensities)
• differential_abundance · function · L18-L28 — def differential_abundance(normalized, case_cols, ctrl_cols)
• simulate_matrix · function · L31-L37 — def simulate_matrix(n_proteins=400, n_true=40, n_per_group=12, seed=0)