skills/bioskills/bio-immunoinformatics-tcr-epitope-binding/scripts/tcr_epitope.py

• levenshtein · function · L18-L27 — def levenshtein(s1, s2)
• cluster_cdr3 · function · L30-L37 — def cluster_cdr3(cdr3_list, max_edits=2)
• lookup_vdjdb · function · L40-L45 — def lookup_vdjdb(cdr3_list, vdjdb, min_confidence=1)
• annotate_clusters · function · L48-L55 — def annotate_clusters(clusters, hits)