skills/bioskills/bio-atac-seq-atac-qc/scripts/atac_qc_metrics.R

• calculate_atac_qc · function · L10-L69 — function(bam_file, peaks_file = NULL, output_prefix = 'atac_qc')
• grade · function · L48-L55 — function(value, accept, ideal, inverted = FALSE)