skills/bioskills/bio-alignment-alignment-trimming/scripts/bmge_trim.py

• run_bmge · function · L12-L23 — def run_bmge(input_fasta, output_fasta, sequence_type='AA', entropy=0.5, gap_threshold=0.2, matrix=None)
• trimming_summary · function · L25-L32 — def trimming_summary(input_fasta, output_fasta)